These downloads are from the Phantome database. Most are generated automatically, please contact Rob Edwards or one of the other phantomers if they appear out of date and you would like more recent files.
The DNA directory contains just the DNA sequences.
This directory contains DNA sequences, one file per database dump. The file is a fasta file, and they are named in the format phage_contigs_TIMESTAMP.fasta, where TIMESTAMP is the current unix time. The higher the number, the newer the file. The contigs in this file are renamed slightly from the original: the original contig names have the genome id and the phage name appended to the contig.
PhAnToMe is a NSF-funded collaborative project of research centers at San Diego State University, University of South Florida, University of Arizona, and University of Virginia. This work is funded by NSF grant DBI: 0850356 from the Division of Biological Infrastructure.
Please contact Rob Edwards if you would like more data, more descriptions, or more formats.